fluidsim merge requestshttps://foss.heptapod.net/fluiddyn/fluidsim/-/merge_requests2021-01-08T06:45:08Zhttps://foss.heptapod.net/fluiddyn/fluidsim/-/merge_requests/189fixed color error2021-01-08T06:45:08ZJason Reneuvefixed color errorred-> magenta for D_4(k_z)red-> magenta for D_4(k_z)https://foss.heptapod.net/fluiddyn/fluidsim/-/merge_requests/188Topic/default/fix print stdout2021-01-05T11:13:09ZJason ReneuveTopic/default/fix print stdoutfix small issues with `print_stdout.plot_clock_times`fix small issues with `print_stdout.plot_clock_times`https://foss.heptapod.net/fluiddyn/fluidsim/-/merge_requests/187Remove old benchmarks2021-01-04T11:10:04ZAshwin V. MohananRemove old benchmarksc.f.: https://foss.heptapod.net/fluiddyn/fluidsim-bench-results
for the right results used in the fluidsim articlec.f.: https://foss.heptapod.net/fluiddyn/fluidsim-bench-results
for the right results used in the fluidsim articleMaintainencehttps://foss.heptapod.net/fluiddyn/fluidsim/-/merge_requests/185Topic/default/better plots ns3d2020-12-18T14:18:31ZJason ReneuveTopic/default/better plots ns3dfix some minor issues with ns3d plots
add cumulative dissipation plot3d in `spectra`fix some minor issues with ns3d plots
add cumulative dissipation plot3d in `spectra`Jason ReneuveJason Reneuvehttps://foss.heptapod.net/fluiddyn/fluidsim/-/merge_requests/184Improve plot_clock_times2020-12-14T15:46:17ZPierre AugierImprove plot_clock_timesPierre AugierPierre Augierhttps://foss.heptapod.net/fluiddyn/fluidsim/-/merge_requests/183plot_clock_times2020-12-11T14:13:22ZPierre Augierplot_clock_timesNew figure on clock times (estimation total time and time per timestep).
@jreneuve can you please check that it works for you and review this code (it seems to work and it is somehow tested).New figure on clock times (estimation total time and time per timestep).
@jreneuve can you please check that it works for you and review this code (it seems to work and it is somehow tested).Jason ReneuveJason Reneuvehttps://foss.heptapod.net/fluiddyn/fluidsim/-/merge_requests/182Topic/default/improve print stdout2020-12-11T07:56:04ZPierre AugierTopic/default/improve print stdoutPierre AugierPierre Augierhttps://foss.heptapod.net/fluiddyn/fluidsim/-/merge_requests/181Use parameters saved in the .h5 file (modif resol)2020-12-07T15:43:58ZPierre AugierUse parameters saved in the .h5 file (modif resol)@jreneuve can you please check that it solves the problem with the wrong parameters in the file created by modif_resol... ?@jreneuve can you please check that it solves the problem with the wrong parameters in the file created by modif_resol... ?Pierre AugierPierre Augierhttps://foss.heptapod.net/fluiddyn/fluidsim/-/merge_requests/180Add few del in ns3d spect_energy_budget2020-12-04T16:03:25ZPierre AugierAdd few del in ns3d spect_energy_budgetI think it's enough like that to run the big simulations on Occigen. @jreneuve can you confirm ?I think it's enough like that to run the big simulations on Occigen. @jreneuve can you confirm ?Pierre AugierPierre Augierhttps://foss.heptapod.net/fluiddyn/fluidsim/-/merge_requests/179Topic/default/modif resol2020-11-25T08:46:45ZPierre AugierTopic/default/modif resol- Implement a new function `modif_resolution_from_dir_memory_efficient`
- Fix #64- Implement a new function `modif_resolution_from_dir_memory_efficient`
- Fix #64Pierre AugierPierre Augierhttps://foss.heptapod.net/fluiddyn/fluidsim/-/merge_requests/178display a warning in case an assert fails2020-10-19T14:14:05ZJason Reneuvedisplay a warning in case an assert failsIn `ns3d.strat.output.spect_energy_budget`, an `assert` seems to fail sometimes. The fail is hard to get in a reproducible manner. I put the `assert` test in a `try` block with a warning, and simulations seem to fine even when the warnin...In `ns3d.strat.output.spect_energy_budget`, an `assert` seems to fail sometimes. The fail is hard to get in a reproducible manner. I put the `assert` test in a `try` block with a warning, and simulations seem to fine even when the warning is triggered.https://foss.heptapod.net/fluiddyn/fluidsim/-/merge_requests/177Version 0.3.32020-10-15T13:28:20ZPierre AugierVersion 0.3.3Pierre AugierPierre Augierhttps://foss.heptapod.net/fluiddyn/fluidsim/-/merge_requests/176Update documentation on installation2020-10-14T20:55:42ZPierre AugierUpdate documentation on installationPierre AugierPierre Augierhttps://foss.heptapod.net/fluiddyn/fluidsim/-/merge_requests/175Use DISABLE_PYHRAN=1 instead of PYTHRAN=02020-10-13T04:11:51ZPierre AugierUse DISABLE_PYHRAN=1 instead of PYTHRAN=0Pierre AugierPierre Augierhttps://foss.heptapod.net/fluiddyn/fluidsim/-/merge_requests/174Use codecov name for Heptapod2020-10-12T09:19:43ZPierre AugierUse codecov name for HeptapodPierre AugierPierre Augierhttps://foss.heptapod.net/fluiddyn/fluidsim/-/merge_requests/173Topic/default/fix travis2020-10-12T08:29:17ZPierre AugierTopic/default/fix travis- Fix Travis CI using Ubuntu 20.04
We use Travis to check that nothing is broken and not to ensure compatibility with old OS. It would be good to be able to do that but it requires too much time and energy.
- Only Python 3.7 and 3.8 ar...- Fix Travis CI using Ubuntu 20.04
We use Travis to check that nothing is broken and not to ensure compatibility with old OS. It would be good to be able to do that but it requires too much time and energy.
- Only Python 3.7 and 3.8 are tested on Travis (it's enough since our CI on Heptapod uses Python 3.6).
- `PYTHRAN` environment variable that can be set to `0` to disable compilation with Pythran (same as for fluidfft).
- Use `CI_COMMIT_SHA` in Heptapod CI for codecov.
- `mpirun -np 2 --oversubscribe` for tests to run fine on Travis with OpenMPI > 3.Pierre AugierPierre Augierhttps://foss.heptapod.net/fluiddyn/fluidsim/-/merge_requests/172Improve ns2d/strat/output/spect_energy_budget.py (load_mean, compute_means)2020-10-08T15:25:11ZCostanza RoddaImprove ns2d/strat/output/spect_energy_budget.py (load_mean, compute_means)Pierre AugierPierre Augierhttps://foss.heptapod.net/fluiddyn/fluidsim/-/merge_requests/171load simul functions: set params.oper.type_fft = "default"2020-10-05T15:50:43ZPierre Augierload simul functions: set params.oper.type_fft = "default"Fix #62Fix #62Pierre AugierPierre Augierhttps://foss.heptapod.net/fluiddyn/fluidsim/-/merge_requests/169Try pyproject.toml2020-10-01T13:15:00ZPierre AugierTry pyproject.tomlPierre AugierPierre Augierhttps://foss.heptapod.net/fluiddyn/fluidsim/-/merge_requests/170Topic/default/doc2020-09-30T15:05:35ZPierre AugierTopic/default/docPierre AugierPierre Augier