fluidsim merge requestshttps://foss.heptapod.net/fluiddyn/fluidsim/-/merge_requests2020-02-12T22:49:39Zhttps://foss.heptapod.net/fluiddyn/fluidsim/-/merge_requests/77Cleanup spatio_temporal_spectra2020-02-12T22:49:39ZBitbucket ImporterCleanup spatio_temporal_spectra*Created originally on Bitbucket by [paugier (Pierre Augier)](https://bitbucket.org/%7Beb327c54-cadd-4fce-9edd-f8fe047a9b93%7D/)*
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https://foss.heptapod.net/fluiddyn/fluidsim/-/merge_requests/76Investigate memory leak2020-02-12T22:49:37ZBitbucket ImporterInvestigate memory leak*Created originally on Bitbucket by [avmo (Ashwin Vishnu)](https://bitbucket.org/%7Bbd72905e-cf99-4847-84c2-998104370f6e%7D/)*
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Related to issue #27*Created originally on Bitbucket by [avmo (Ashwin Vishnu)](https://bitbucket.org/%7Bbd72905e-cf99-4847-84c2-998104370f6e%7D/)*
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Related to issue #27https://foss.heptapod.net/fluiddyn/fluidsim/-/merge_requests/75same shape spatio_temp in MPI and SEQ + time_windows instead of nb_periods_N ...2020-02-12T22:49:36ZBitbucket Importersame shape spatio_temp in MPI and SEQ + time_windows instead of nb_periods_N + no docstring + black*Created originally on Bitbucket by [calpe (Miguel Calpe)](https://bitbucket.org/%7B3a110e54-047d-4a20-bfc6-0f16d9ecf7a6%7D/)*
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* Fixed last state.
...*Created originally on Bitbucket by [calpe (Miguel Calpe)](https://bitbucket.org/%7B3a110e54-047d-4a20-bfc6-0f16d9ecf7a6%7D/)*
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* Fixed last state.
* Add parameter mode=\(\) to test file.
* New compute\_spatio\_temporal\_spectra \+ plot\_kx\_omega\_cross\_section.
* Normalization by N plot\_frequency\_spectra \+ saved windows\_size.
* Add function spatio\_temporal\_spectra.plot\_kx\_omega\_cross\_section in test\_solver.py.
* Check parameters angle \+ black.
* Black.
* spatio\_temp\_new MPI = SEQ \+ time\_windows instead nb\_periods\_N \+ clean up docstring \+ black.https://foss.heptapod.net/fluiddyn/fluidsim/-/merge_requests/74PR it_start outputs + improvements module phys_fields2d + make black2020-02-12T22:49:35ZBitbucket ImporterPR it_start outputs + improvements module phys_fields2d + make black*Created originally on Bitbucket by [calpe (Miguel Calpe)](https://bitbucket.org/%7B3a110e54-047d-4a20-bfc6-0f16d9ecf7a6%7D/)*
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* Fix good it\_start ...*Created originally on Bitbucket by [calpe (Miguel Calpe)](https://bitbucket.org/%7B3a110e54-047d-4a20-bfc6-0f16d9ecf7a6%7D/)*
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* Fix good it\_start spatio\_temporal\_spectra and frequency\_spectra.
* Improvements on module phys\_fields2d.py
* Time interpolation class method plot.
* Make black calpe/fluidsim.https://foss.heptapod.net/fluiddyn/fluidsim/-/merge_requests/73Fix issue 26 (bug load_for_restart with merge_missing_params and MPI)2019-02-06T08:26:19ZBitbucket ImporterFix issue 26 (bug load_for_restart with merge_missing_params and MPI)*Created originally on Bitbucket by [paugier (Pierre Augier)](https://bitbucket.org/%7Beb327c54-cadd-4fce-9edd-f8fe047a9b93%7D/)*
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https://foss.heptapod.net/fluiddyn/fluidsim/-/merge_requests/72Update readme and doc install2020-02-12T22:49:33ZBitbucket ImporterUpdate readme and doc install*Created originally on Bitbucket by [avmo (Ashwin Vishnu)](https://bitbucket.org/%7Bbd72905e-cf99-4847-84c2-998104370f6e%7D/)*
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This request was auto...*Created originally on Bitbucket by [avmo (Ashwin Vishnu)](https://bitbucket.org/%7Bbd72905e-cf99-4847-84c2-998104370f6e%7D/)*
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This request was automatically generatedhttps://foss.heptapod.net/fluiddyn/fluidsim/-/merge_requests/71Hotfix fluidsim.solver.sw1l.output JIT extension2020-02-12T22:49:32ZBitbucket ImporterHotfix fluidsim.solver.sw1l.output JIT extension*Created originally on Bitbucket by [avmo (Ashwin Vishnu)](https://bitbucket.org/%7Bbd72905e-cf99-4847-84c2-998104370f6e%7D/)*
*Changesets for this Pull Request have not been imported, because it had been already declined on Bitbucket...*Created originally on Bitbucket by [avmo (Ashwin Vishnu)](https://bitbucket.org/%7Bbd72905e-cf99-4847-84c2-998104370f6e%7D/)*
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This request was automatically generatedhttps://foss.heptapod.net/fluiddyn/fluidsim/-/merge_requests/70On %fluidsim magic2019-02-01T21:03:46ZBitbucket ImporterOn %fluidsim magic*Created originally on Bitbucket by [avmo (Ashwin Vishnu)](https://bitbucket.org/%7Bbd72905e-cf99-4847-84c2-998104370f6e%7D/)*
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A bug fix and allow l...*Created originally on Bitbucket by [avmo (Ashwin Vishnu)](https://bitbucket.org/%7Bbd72905e-cf99-4847-84c2-998104370f6e%7D/)*
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A bug fix and allow loading magic as %load_ext fluidsimhttps://foss.heptapod.net/fluiddyn/fluidsim/-/merge_requests/69Version 0.3.02020-02-12T22:49:31ZBitbucket ImporterVersion 0.3.0*Created originally on Bitbucket by [paugier (Pierre Augier)](https://bitbucket.org/%7Beb327c54-cadd-4fce-9edd-f8fe047a9b93%7D/)*
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## 0.3.0 \(2019-01-31\)
* Drop support for Python 2.7!
* Accelerated by Transonic & Pythran \(also time stepping\)
* Better [setup.py](http://setup.py) \(by Ashwin Vishnu\)
* Improvement ns2d.strat \(by Miguel Calpe Linares\)
* Much better testing \(internal, CI, compatibility pytest, coverage 87%\)
* Fix several bugs :-\)
* New function load\_for\_restarthttps://foss.heptapod.net/fluiddyn/fluidsim/-/merge_requests/68Requires transonic>=0.1.9.post02019-01-31T00:18:06ZBitbucket ImporterRequires transonic>=0.1.9.post0*Created originally on Bitbucket by [avmo (Ashwin Vishnu)](https://bitbucket.org/%7Bbd72905e-cf99-4847-84c2-998104370f6e%7D/)*
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This request was auto...*Created originally on Bitbucket by [avmo (Ashwin Vishnu)](https://bitbucket.org/%7Bbd72905e-cf99-4847-84c2-998104370f6e%7D/)*
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This request was automatically generatedhttps://foss.heptapod.net/fluiddyn/fluidsim/-/merge_requests/67FluidSim with transonic>0.1.9 and optionally fluidsht >= 0.0.3a02019-01-30T19:02:34ZBitbucket ImporterFluidSim with transonic>0.1.9 and optionally fluidsht >= 0.0.3a0*Created originally on Bitbucket by [avmo (Ashwin Vishnu)](https://bitbucket.org/%7Bbd72905e-cf99-4847-84c2-998104370f6e%7D/)*
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Requires transonic an...*Created originally on Bitbucket by [avmo (Ashwin Vishnu)](https://bitbucket.org/%7Bbd72905e-cf99-4847-84c2-998104370f6e%7D/)*
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Requires transonic and fluidsht releases, merge when the new releases are outhttps://foss.heptapod.net/fluiddyn/fluidsim/-/merge_requests/66Fixed bug phys_fields2d.plot()2019-01-29T15:39:47ZBitbucket ImporterFixed bug phys_fields2d.plot()*Created originally on Bitbucket by [calpe (Miguel Calpe)](https://bitbucket.org/%7B3a110e54-047d-4a20-bfc6-0f16d9ecf7a6%7D/)*
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* Resolved bug spatia...*Created originally on Bitbucket by [calpe (Miguel Calpe)](https://bitbucket.org/%7B3a110e54-047d-4a20-bfc6-0f16d9ecf7a6%7D/)*
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* Resolved bug spatial decimate.
* Fixed bug method phys\_fields2d.plot\(\).https://foss.heptapod.net/fluiddyn/fluidsim/-/merge_requests/65Use transonic.dist in setup2020-02-12T22:49:27ZBitbucket ImporterUse transonic.dist in setup*Created originally on Bitbucket by [avmo (Ashwin Vishnu)](https://bitbucket.org/%7Bbd72905e-cf99-4847-84c2-998104370f6e%7D/)*
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Apart from a faling t...*Created originally on Bitbucket by [avmo (Ashwin Vishnu)](https://bitbucket.org/%7Bbd72905e-cf99-4847-84c2-998104370f6e%7D/)*
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Apart from a faling to compile without cython - which is also present in the main repo, it works for me in a fresh environmenthttps://foss.heptapod.net/fluiddyn/fluidsim/-/merge_requests/64Update README + fix tests + add bad tests for sphere2020-02-12T22:49:26ZBitbucket ImporterUpdate README + fix tests + add bad tests for sphere*Created originally on Bitbucket by [paugier (Pierre Augier)](https://bitbucket.org/%7Beb327c54-cadd-4fce-9edd-f8fe047a9b93%7D/)*
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I removed the \\r from the README. Otherwise, nothing great but I think it’s worth including this commit in the main repo.https://foss.heptapod.net/fluiddyn/fluidsim/-/merge_requests/63Reorganize setup process, setup_requires works...2020-02-12T22:49:25ZBitbucket ImporterReorganize setup process, setup_requires works...*Created originally on Bitbucket by [paugier (Pierre Augier)](https://bitbucket.org/%7Beb327c54-cadd-4fce-9edd-f8fe047a9b93%7D/)*
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* Setup reorganized, setup\_requires works...
* Rename test\_solver files \+ fix setup.py issue with Pythran
* Add compiler section in Travis .pythranrc
* pythran before fluidfft in tox.inihttps://foss.heptapod.net/fluiddyn/fluidsim/-/merge_requests/62Testing and setup2019-01-24T09:12:15ZBitbucket ImporterTesting and setup*Created originally on Bitbucket by [paugier (Pierre Augier)](https://bitbucket.org/%7Beb327c54-cadd-4fce-9edd-f8fe047a9b93%7D/)*
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* Improve coverage \(mainly base and util\)
* Coverage base.output.spatial\_means
* Testing and setuphttps://foss.heptapod.net/fluiddyn/fluidsim/-/merge_requests/61Fix fluidsim_load, remove pyfftw constraint and misc. changes2019-01-22T20:34:15ZBitbucket ImporterFix fluidsim_load, remove pyfftw constraint and misc. changes*Created originally on Bitbucket by [avmo (Ashwin Vishnu)](https://bitbucket.org/%7Bbd72905e-cf99-4847-84c2-998104370f6e%7D/)*
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* Remove pyfftw const...*Created originally on Bitbucket by [avmo (Ashwin Vishnu)](https://bitbucket.org/%7Bbd72905e-cf99-4847-84c2-998104370f6e%7D/)*
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* Remove pyfftw constraint \(wrong message in commit message\)
* Comment out sw1l.exactlin.modified verify tendencies method, cosmetic changes in lorenz solver
* Fix %fluidsim\_load magic and also add -t option
* Fix #24https://foss.heptapod.net/fluiddyn/fluidsim/-/merge_requests/60Refactor tests into one testcase per solver2020-02-12T22:49:22ZBitbucket ImporterRefactor tests into one testcase per solver*Created originally on Bitbucket by [avmo (Ashwin Vishnu)](https://bitbucket.org/%7Bbd72905e-cf99-4847-84c2-998104370f6e%7D/)*
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Related to #22*Created originally on Bitbucket by [avmo (Ashwin Vishnu)](https://bitbucket.org/%7Bbd72905e-cf99-4847-84c2-998104370f6e%7D/)*
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Related to #22https://foss.heptapod.net/fluiddyn/fluidsim/-/merge_requests/59byebye fluidpythran, hello transonic2019-01-21T15:16:15ZBitbucket Importerbyebye fluidpythran, hello transonic*Created originally on Bitbucket by [paugier (Pierre Augier)](https://bitbucket.org/%7Beb327c54-cadd-4fce-9edd-f8fe047a9b93%7D/)*
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https://foss.heptapod.net/fluiddyn/fluidsim/-/merge_requests/58Migrate some oper attributes and methods to sw1l2019-01-19T12:53:38ZBitbucket ImporterMigrate some oper attributes and methods to sw1l*Created originally on Bitbucket by [avmo (Ashwin Vishnu)](https://bitbucket.org/%7Bbd72905e-cf99-4847-84c2-998104370f6e%7D/)*
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Fixes #21*Created originally on Bitbucket by [avmo (Ashwin Vishnu)](https://bitbucket.org/%7Bbd72905e-cf99-4847-84c2-998104370f6e%7D/)*
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Fixes #21